Takayuki Katoh, Ph.D.

Assistant Professor



Education

1997:
B.Sc., School of Engineering, The University of Tokyo
Thesis advisor: Prof. Kimitsuna Watanabe
1999:
M.Sc., Graduate School of Engineering, The University of Tokyo
Thesis advisor: Prof. Kimitsuna Watanabe
2004:
Ph.D., Graduate School of Engineering, The University of Tokyo
Thesis advisor: Prof. Tsutomu Suzuki

Professional career

2004-2005:
Research fellow, iGENE therapeutics, inc., Visiting researcher, Graduate School of Engineering, The University of Tokyo
2005-2009:
Research fellow, Japan biological informatics consortium
2009-2010:
Assistant professor, Research Center for Advanced Science and Technology, The University of Tokyo
2010-present:
Assistant professor, Graduate School of Science, The University of Tokyo

Publication

"Structural basis for the drug extrusion mechanism by a MATE multidrug transporter"
Y. Tanaka, C. J. Hipolito, A. D. Maturana, K. Ito, T. Kuroda, T. Higuchi, T. Katoh, H. E. Kato, M. Hattori, K. Kumazaki, T. Tsukazaki, R. Ishitani, H. Suga, O. Nureki
Nature, 496, 247-251 (2013)
"Selective thioether macrocyclization of peptides having the N-terminal 2-chloroacetyl group and competing two or three cysteine residues in translation"
Iwasaki, K.; Goto, Y.; Katoh, T.; Suga, H.
Organic & Biomolecular Chemistry, 2012, in press.
"Charging of tRNAs Using Ribozymes and Selection of Cyclic Peptides Containing Thioethers"
Reid, P.C.; Goto, Y.; Katoh, T.; Suga, H.
Methods in Molecular Biology, 2012, 805, 335-348.
"Natural product-like macrocyclic N-methyl-peptide inhibitors against a ubiquitin ligase uncovered from a ribosome-expressed de novo library"
Yamagishi, Y.; Shoji, I.; Miyagawa, S.; Kawakami, T.; Katoh, T.; Goto, Y.; Suga, H.
Chemistry & Biology, 2011, in press.
"Ribosomal synthesis of backbone macrocyclic peptides"
Katoh, T.; Goto, Y.; Reza, M.S. Suga, H.
Chemical Communications, 2011, 47, 9946-9958.
"Flexizymes for genetic code reprogramming"
Goto, Y.; Katoh, T.; Suga, H.
Nature Protocols, 2011, 6, 779-790.
"Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae"
Noma, A.; Yi, S.; Katoh, T.; Takai, Y.; Suzuki, T.; Suzuki, T.
RNA 17, 1111-1119 (2011)
"Biogenesis of glutaminyl-mt tRNAGln in human mitochondria"
Nagao, A., Suzuki, T., Katoh, T., Sakaguchi, Y. and Suzuki, T.
Proc. Natl. Acad. Sci. USA, 106, 16209-16214(2009)
"Selective stabilization of mammalian microRNAs by 3’-adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2"
Katoh, T., Sakaguchi, Y., Miyauchi, K., Suzuki, T., Kashiwabara, S., Baba, T. and Suzuki, T.
Genes Dev., 23, 433-438(2009)
"Specific residues at every third position of siRNA shape its efficient RNAi activity"
Katoh, T. and Suzuki, T.
Nucleic Acids Res., 35, e27(2007)
"Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase"
Nagaike, T., Suzuki, T., Katoh, T. and Ueda, T.
J. Biol. Chem., 280, 19721-19727(2005)
"Simple and rapid synthesis of siRNA derived from in vitro transcribed shRNA"
Katoh, T., Susa, M., Suzuki, T., Umeda, N., Watanabe, K. and Suzuki, T.
Nucleic Acids Res. Suppl., 3, 249-250 (2003)

Contact Info

  • Room #2207, West wing, Chemistry Bildg.
    Department of Chemistry, Graduate School of Science, The University of Tokyo
  • E-mail… katoh"at"chem.s.u-tokyo.ac.jp (change "at" to @)
  • TEL…+81-3-5841-4638
  • FAX…+81-3-5841-8372